clone

Nov 21, 2023

Changes in this version

type Enzyme

+ OverheadLength int

+ func GetBaseRestrictionEnzymes() []Enzyme

+ type EnzymeManager struct

+ func NewEnzymeManager(enzymes []Enzyme) EnzymeManager

+ func (enzymeManager EnzymeManager) CutWithEnzymeByName(part Part, directional bool, name string) ([]Fragment, error)

+ func (enzymeManager EnzymeManager) GetEnzymeByName(name string) (Enzyme, error)

Jul 22, 2023

Changes in this version

type Overhang

+ RecognitionSitePlusSkipLength int

Jul 9, 2021

Changes in this version

+ type Enzyme struct

+ Name string

+ OverhangLen int

+ RecognitionSite string

+ RegexpFor *regexp.Regexp

+ RegexpRev *regexp.Regexp

+ Skip int

+ type Fragment struct

+ ForwardOverhang string

+ ReverseOverhang string

+ Sequence string

+ func CutWithEnzyme(seq Part, directional bool, enzyme Enzyme) []Fragment

+ func CutWithEnzymeByName(seq Part, directional bool, enzymeStr string) ([]Fragment, error)

+ type Overhang struct

+ Forward bool

+ Length int

+ Position int

+ type Part struct

+ Circular bool

+ Sequence string

+ func CircularLigate(fragments []Fragment) []Part

+ func GoldenGate(sequences []Part, enzymeStr string) ([]Part, error)