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quality

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Versions in this module

v1

v1.0.4

Oct 29, 2021

v1.0.3

Dec 1, 2020

v1.0.2

Jan 6, 2020

v1.0.1

Feb 16, 2017

v1.0.0

Jan 5, 2017

Changes in this version

+ type Phred struct

+ Encode alphabet.Encoding

+ Qual Qphreds

+ func NewPhred(id string, q []alphabet.Qphred, encode alphabet.Encoding) *Phred

+ func (q *Phred) Append(a ...alphabet.Qphred)

+ func (q *Phred) At(i int) alphabet.Qphred

+ func (q *Phred) Copy() seq.Quality

+ func (q *Phred) EAt(i int) float64

+ func (q *Phred) Encoding() alphabet.Encoding

+ func (q *Phred) End() int

+ func (q *Phred) Len() int

+ func (q *Phred) QDecode(l byte) alphabet.Qphred

+ func (q *Phred) QEncode(i int) byte

+ func (q *Phred) Reverse()

+ func (q *Phred) Set(i int, qual alphabet.Qphred) error

+ func (q *Phred) SetE(i int, e float64) error

+ func (q *Phred) SetEncoding(e alphabet.Encoding) error

+ func (q *Phred) SetSlice(sl alphabet.Slice)

+ func (q *Phred) Slice() alphabet.Slice

+ func (q *Phred) Start() int

+ func (q *Phred) String() string

+ type Qphreds []alphabet.Qphred

+ func (q Qphreds) Append(a alphabet.Slice) alphabet.Slice

+ func (q Qphreds) Cap() int

+ func (q Qphreds) Copy(a alphabet.Slice) int

+ func (q Qphreds) Len() int

+ func (q Qphreds) Make(len, cap int) alphabet.Slice

+ func (q Qphreds) Slice(start, end int) alphabet.Slice

+ type Qsolexas []alphabet.Qsolexa

+ func (q Qsolexas) Append(a alphabet.Slice) alphabet.Slice

+ func (q Qsolexas) Cap() int

+ func (q Qsolexas) Copy(a alphabet.Slice) int

+ func (q Qsolexas) Len() int

+ func (q Qsolexas) Make(len, cap int) alphabet.Slice

+ func (q Qsolexas) Slice(start, end int) alphabet.Slice

+ type Solexa struct

+ Encode alphabet.Encoding

+ Qual Qsolexas

+ func NewSolexa(id string, q []alphabet.Qsolexa, encode alphabet.Encoding) *Solexa

+ func (q *Solexa) Append(a ...alphabet.Qsolexa)

+ func (q *Solexa) At(i int) alphabet.Qsolexa

+ func (q *Solexa) Copy() seq.Quality

+ func (q *Solexa) EAt(i int) float64

+ func (q *Solexa) Encoding() alphabet.Encoding

+ func (q *Solexa) End() int

+ func (q *Solexa) Len() int

+ func (q *Solexa) QDecode(l byte) alphabet.Qsolexa

+ func (q *Solexa) QEncode(i int) byte

+ func (q *Solexa) Reverse()

+ func (q *Solexa) Set(i int, qual alphabet.Qsolexa) error

+ func (q *Solexa) SetE(i int, e float64) error

+ func (q *Solexa) SetEncoding(e alphabet.Encoding) error

+ func (q *Solexa) SetSlice(sl alphabet.Slice)

+ func (q *Solexa) Slice() alphabet.Slice

+ func (q *Solexa) Start() int

+ func (q *Solexa) String() string