complexity

package

v1.0.3 Latest Latest Go to latest Published: Dec 1, 2020 License: BSD-3-Clause Imports: 4 Imported by: 1

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Package complexity provides routines for evaluating sequence complexity.

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func Entropic(s seq.Sequence, start, end int) (ce float64, err error)

Entropic returns the entropic complexity of a segment of s defined by start and end.

func WF(s seq.Sequence, start, end int) (cwf float64, err error)

WF returns the Wootton and Federhen complexity of a segment of s defined by start and end.

func Z(s seq.Sequence, start, end int) (cz float64, err error)

Z returns the zlib compression estimate of complexity of a segment of s defined by start and end.

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