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agc

package module

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Versions in this module

v0

v0.4.0

Oct 1, 2026

Changes in this version

type Archive

+ func OpenURL(ctx context.Context, rawURL string, client *http.Client) (*Archive, error)

+ func OpenURLWithOptions(ctx context.Context, rawURL string, options HTTPOptions) (*Archive, error)

+ type HTTPOptions struct

+ CacheBytes int64

+ Client *http.Client

+ Concurrency int

+ MaxMergedRangeBytes int64

+ MergeGapBytes int64

+ ReadAheadBytes int64

+ WholeObjectFraction float64

+ WholeObjectThreshold int64

v0.3.0

Sep 17, 2026

v0.2.0

Aug 19, 2026

Changes in this version

type Archive

+ func (a *Archive) NewContigReader(sample Sample) (*ContigReader, error)

+ type ContigReader struct

+ func (r *ContigReader) Read() (Contig, error)

v0.1.0

Aug 14, 2026

Changes in this version

+ var ErrClosed = errors.New("agc: archive is closed")

+ var ErrContigNotFound = errors.New("agc: contig not found")

+ var ErrCorruptArchive = errors.New("agc: corrupt archive")

+ var ErrSampleNotFound = errors.New("agc: sample not found")

+ var ErrUnsupportedVersion = errors.New("agc: unsupported file-format version")

+ type Archive struct

+ func Open(path string) (*Archive, error)

+ func OpenReaderAt(r io.ReaderAt, size int64) (*Archive, error)

+ func (a *Archive) Close() error

+ func (a *Archive) Contig(sample Sample, name string) (Contig, error)

+ func (a *Archive) Contigs(sample Sample) ([]ContigInfo, error)

+ func (a *Archive) IterateAll(yield func(Contig) error) error

+ func (a *Archive) IterateSample(sample Sample, yield func(Contig) error) error

+ func (a *Archive) ReferenceSample() (Sample, error)

+ func (a *Archive) Samples() ([]Sample, error)

+ func (a *Archive) Version() Version

+ type Contig struct

+ Name string

+ Sample Sample

+ Sequence []byte

+ type ContigInfo struct

+ Name string

+ Sample Sample

+ type Sample struct

+ Name string

+ type Version struct

+ Major uint32

+ Minor uint32