fastqsplit

README

fastqsplit

Splits fastq files by lane.

Takes gzipped fastq files of the form "prefix_suffix" and writes gzipped files of the form "prefix_lane_suffix".

Usage

fastqsplit fastq_file(s)

Notes

• fastq files must be gzipped
• Does approximately 10M lines every 13s (depending on CPU speed)

Building

go get github.com/klauspost/pgzip/
go build fastqsplit.go

Binaries

Download binaries for Linux or OSX from the releases page.