feat

Documentation

Overview

Basic Feature package

Index

• Variables
• type Feature
  • func New(ID string) *Feature
  • func (self *Feature) Len() int
  • func (self *Feature) MoltypeAsString() string
  • func (self *Feature) String() string
• type FeatureSet
  • func (self FeatureSet) Add(f *Feature) (g FeatureSet)

Variables

var StringFunc = defaultStringFunc

Return the canonical string conversion of the Feature - for particulat formats, use bio/io/featio/ packages.

Types

type Feature

type Feature struct {
	ID          string
	Source      string
	Location    string
	Start       int
	End         int
	Feature     string
	Score       *float64
	Probability *float64
	Attributes  string
	Comments    string
	Frame       int8
	Strand      int8
	Moltype     bio.Moltype
	Meta        interface{}
}

Feature type

func New

func New(ID string) *Feature

Return a new Feature

func (*Feature) Len

func (self *Feature) Len() int

Return the length of a Feature

func (*Feature) MoltypeAsString

func (self *Feature) MoltypeAsString() string

Return the molecule type of the Feature

func (*Feature) String

func (self *Feature) String() string

type FeatureSet

type FeatureSet []*Feature

func (FeatureSet) Add

func (self FeatureSet) Add(f *Feature) (g FeatureSet)