hotsub
The simple batch job driver on AWS and GCP. (Azure, OpenStack are coming soon)
hotsub run \
--script ./star-alignment.sh \
--tasks ./star-alignment-tasks.csv \
--image friend1ws/star-alignment \
--aws-ec2-instance-type t2.2xlarge \
--verbose
It will
- execute workflow described in
star-alignment.sh
- for each samples specified in
star-alignment.csv
- in
friend1ws/star-alignment
docker containers
- on EC2 instances of type
t2.2xlarge
and automatically upload the output files to S3 and clean up EC2 instances after all.
See Documentation for more details.
Installation
Check Getting Started on GitHub Pages
To make it transparent, ask any question from this link.
https://github.com/otiai10/hotsub/issues