graph

package
v1.0.0 Latest Latest
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 Go to latest Published: Dec 19, 2019 License: MIT Imports: 13 Imported by: 0

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Constants

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Variables

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Functions

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Types

type EqualWeightPath added in v0.5.0 

type EqualWeightPath struct {
	// contains filtered or unexported fields
}

func NewEqualWeightPath added in v0.5.0 

func NewEqualWeightPath(names []string, weight unit.Weight) *EqualWeightPath

func (EqualWeightPath) Names added in v0.5.0 

func (p EqualWeightPath) Names() []string

func (EqualWeightPath) Weights added in v0.5.0 

func (p EqualWeightPath) Weights() []unit.Weight

type FractionalWeightPath added in v0.5.0 

type FractionalWeightPath struct {
	// contains filtered or unexported fields
}

func NewFractionalWeightPath added in v0.5.0 

func NewFractionalWeightPath(names []string, weight unit.Weight) *FractionalWeightPath

func (FractionalWeightPath) Names added in v0.5.0 

func (p FractionalWeightPath) Names() []string

func (FractionalWeightPath) Weights added in v0.5.0 

func (p FractionalWeightPath) Weights() []unit.Weight

type Graph 

type Graph struct {
	// contains filtered or unexported fields
}

Graph has named nodes/vertexes

func NewGraph 

func NewGraph(indvs []string) *Graph

func NewGraphFromCsvInput 

func NewGraphFromCsvInput(in relatedness.CsvInput, minDist relational.Degree, pars parentage.CsvInput, dems demographics.CsvInput) *Graph

func (*Graph) AddAge added in v0.10.0 

func (graph *Graph) AddAge(name string, age demographics.Age)

func (*Graph) AddDam added in v0.13.0 

func (graph *Graph) AddDam(name, dam string)

func (*Graph) AddInfo added in v0.10.0 

func (graph *Graph) AddInfo(name string, info Info)

func (*Graph) AddNode 

func (graph *Graph) AddNode(n gonumGraph.Node)

func (*Graph) AddNodeNamed added in v0.5.0 

func (graph *Graph) AddNodeNamed(name string)

func (*Graph) AddPath 

func (graph *Graph) AddPath(p Path)

func (*Graph) AddSex added in v0.10.0 

func (graph *Graph) AddSex(name string, sex demographics.Sex)

func (*Graph) AddSire added in v0.13.0 

func (graph *Graph) AddSire(name, sire string)

func (*Graph) Edge 

func (graph *Graph) Edge(uid, vid int64) gonumGraph.Edge

func (*Graph) EdgeBetween added in v0.5.0 

func (graph *Graph) EdgeBetween(xid, yid int64) gonumGraph.Edge

func (*Graph) EdgeBetweenNamed added in v0.5.0 

func (graph *Graph) EdgeBetweenNamed(n1, n2 string) gonumGraph.Edge

func (*Graph) EdgeNamed added in v0.5.0 

func (graph *Graph) EdgeNamed(n1, n2 string) gonumGraph.Edge

func (*Graph) Edges 

func (graph *Graph) Edges() gonumGraph.Edges

func (*Graph) From 

func (graph *Graph) From(id int64) gonumGraph.Nodes

func (*Graph) FromNamed added in v0.5.0 

func (graph *Graph) FromNamed(name string) gonumGraph.Nodes

func (*Graph) HasEdgeBetween added in v0.5.0 

func (graph *Graph) HasEdgeBetween(xid, yid int64) bool

func (*Graph) HasEdgeBetweenNamed added in v0.5.0 

func (graph *Graph) HasEdgeBetweenNamed(n1, n2 string) bool

func (*Graph) IDToName added in v0.5.0 

func (graph *Graph) IDToName(id int64) (string, bool)

IDToName converts the id to its corresponding node name Returns false if the node does not exist

func (*Graph) Info added in v0.10.0 

func (graph *Graph) Info(name string) Info

func (*Graph) IsKnown added in v0.5.0 

func (graph *Graph) IsKnown(name string) bool

func (*Graph) NameToID added in v0.5.0 

func (graph *Graph) NameToID(name string) (int64, bool)

NameToID converts the name to its corresponding node ID Returns false if the node does not exist

func (*Graph) NewNode added in v0.5.0 

func (graph *Graph) NewNode() gonumGraph.Node

func (*Graph) NewWeightedEdge 

func (graph *Graph) NewWeightedEdge(from, to gonumGraph.Node, weight float64) gonumGraph.WeightedEdge

func (*Graph) NewWeightedEdgeNamed added in v0.12.0 

func (graph *Graph) NewWeightedEdgeNamed(n1, n2 string, weight unit.Weight) gonumGraph.WeightedEdge

func (*Graph) Node 

func (graph *Graph) Node(id int64) gonumGraph.Node

func (*Graph) NodeNamed added in v0.5.0 

func (graph *Graph) NodeNamed(name string) gonumGraph.Node

func (*Graph) Nodes 

func (graph *Graph) Nodes() gonumGraph.Nodes

func (*Graph) Prune added in v0.14.0 

func (graph *Graph) Prune()

func (*Graph) RemoveEdge added in v0.12.0 

func (graph *Graph) RemoveEdge(fid, tid int64)

func (*Graph) RemoveNode 

func (graph *Graph) RemoveNode(id int64)

func (*Graph) RemoveNodeNamed added in v0.5.0 

func (graph *Graph) RemoveNodeNamed(name string)

func (*Graph) RmDisconnected 

func (graph *Graph) RmDisconnected()

func (*Graph) SetWeightedEdge added in v0.12.0 

func (graph *Graph) SetWeightedEdge(e gonumGraph.WeightedEdge)

func (*Graph) String added in v0.5.0 

func (graph *Graph) String() string

func (*Graph) Weight 

func (graph *Graph) Weight(xid, yid int64) (w float64, ok bool)

func (*Graph) WeightNamed added in v0.5.0 

func (graph *Graph) WeightNamed(n1, n2 string) (w float64, ok bool)

func (*Graph) WeightedEdge 

func (graph *Graph) WeightedEdge(uid, vid int64) gonumGraph.WeightedEdge

func (*Graph) WeightedEdgeNamed added in v0.5.0 

func (graph *Graph) WeightedEdgeNamed(n1, n2 string) gonumGraph.WeightedEdge

func (*Graph) WeightedEdges 

func (graph *Graph) WeightedEdges() gonumGraph.WeightedEdges

type Info added in v0.10.0 

type Info struct {
	ID        int64
	Sex       demographics.Sex
	Age       demographics.Age
	Dam, Sire string
}

type Path added in v0.5.0 

type Path interface {
	Names() []string
	Weights() []unit.Weight
}

type RelationalWeightPath added in v0.5.0 

type RelationalWeightPath struct {
	// contains filtered or unexported fields
}

func NewRelationalWeightPath added in v0.5.0 

func NewRelationalWeightPath(from, to string, dist relational.Degree, weight unit.Weight) (*RelationalWeightPath, error)

func (RelationalWeightPath) Names added in v0.5.0 

func (p RelationalWeightPath) Names() []string

func (RelationalWeightPath) Weights added in v0.5.0 

func (p RelationalWeightPath) Weights() []unit.Weight

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